PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc030886.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 444aa MW: 49766.7 Da PI: 5.1784 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.4 | 1.6e-13 | 169 | 211 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl Cse_sc030886.1_g010.1 169 AEEDAKILAYVASHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 211 59***************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 219 | 260 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E++l++++++ G++ W++Ia+ ++ gRt++++k++w++ Cse_sc030886.1_g010.1 219 SFTPDEEDLILRYHQAIGSR-WSLIAQQLP-GRTDNDVKNHWNT 260 79******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence |
MVCLLSCNAF LKDEVVAGVE SRISAWTFLP VENGESMQIL HYENGQKYEP HWDYFHDKAN 60 QALGGHRIAT VLMYLSNVQK VKPKKGDALR FFSLHPNATT DVLSLHGSCP VIEGEKWSAT 120 KWIHVRNFDK PDDTSDECKD ENVNCSTWAA SGECIKNPVY MVGSAEGLAE EDAKILAYVA 180 SHGIGNWTLV PQKAGLNRCG KSCRLRWTNY LRPDLKHDSF TPDEEDLILR YHQAIGSRWS 240 LIAQQLPGRT DNDVKNHWNT KLKKKLSKMG IDPITHKPFG QLLSDYGNIN DIIPPNMRPS 300 DQRHQEPSEF SHADSSLTMM DPYQEPQTPM SLMPAHFQVI NEAASSSTSS PAASIVQVNL 360 PSSPSVWSDY LVGDQEQECT NESDLGILPT KVENLNNYSG VGVDHTKNSL DVATTSVSFV 420 ESILNRDREM ELDFPQLFDG YSEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 8e-67 | MYB family protein |