PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030493.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 695aa MW: 78092.5 Da PI: 8.6854

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030493.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.4	8.6e-17	484	577	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + + ++k++r+++ + tgCka+++ ++ + k+++t +++ Cse_sc030493.1_g010.1 484 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITGCKARVMFELIPgSTKYKLTVFDS 570 99**********998887.8898*********99988888999888899999999***********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc030493.1_g010.1 571 IHNHELE 577 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MLFQVGGQGS HPTFFEMSAA QQLPSSLRAA LTYSIGVLAL RRPFLHKVLD YEDEFFAALT 60 LILETHSLRT TDASFAETLY GLRRRAVNVQ VKKDDIMETG NRIQNSGLRK RQKLLSVVFL 120 VVLPYFKSKL HAIYNKEREA ALQASLWGNF NERFDEFETL GDASSSFAST SGSDTDLSVR 180 TRFRKRMNKI VATCYPWLHA GSEGLAFAYQ LLYLLDATGF YSPGLHALGL QVCRATGQEL 240 MDTSSRISKI RSNERERLRG PPWLKTVQGA LLTCAYALLD YAQTGLIAAV FGFKMMEWWY 300 QSAEERMSAP TVYPPPPPPP APKVAKEGIP LPPDRTICPL CSQKRANPSA VTVSGFVFCY 360 ACIFKYVSQY NRCPVTLIPA TVDHIRRLFH DLVVVSVTES ASEDVVVSDD VSAKYTEEIV 420 AYEHGDESAA IKKLNALKTP ESFSTHSNFD TPGGTVYYIP KVPVDVLLAK GNVFNSVDEC 480 ISAYMKYASK AGFVVRKSCQ KRLRSGIVKQ KYLVCNREGC PKGIHVDTLD LENSDKQKRS 540 SNLHITGCKA RVMFELIPGS TKYKLTVFDS IHNHELERKE YKHLSKTESQ LTYAEQLFIV 600 KAASVNISAT RAHHLLTGLK GSYLLVHGTT FDFKNFFRSV NCYIGDSDAQ MLIAKMENRQ 660 KHVSDFSFDY LVENAELSAI FWADEVSKYN YKEFC

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MLFQVGGQGS HPTFFEMSAA QQLPSSLRAA LTYSIGVLAL RRPFLHKVLD YEDEFFAALT  60
LILETHSLRT TDASFAETLY GLRRRAVNVQ VKKDDIMETG NRIQNSGLRK RQKLLSVVFL  120
VVLPYFKSKL HAIYNKEREA ALQASLWGNF NERFDEFETL GDASSSFAST SGSDTDLSVR  180
TRFRKRMNKI VATCYPWLHA GSEGLAFAYQ LLYLLDATGF YSPGLHALGL QVCRATGQEL  240
MDTSSRISKI RSNERERLRG PPWLKTVQGA LLTCAYALLD YAQTGLIAAV FGFKMMEWWY  300
QSAEERMSAP TVYPPPPPPP APKVAKEGIP LPPDRTICPL CSQKRANPSA VTVSGFVFCY  360
ACIFKYVSQY NRCPVTLIPA TVDHIRRLFH DLVVVSVTES ASEDVVVSDD VSAKYTEEIV  420
AYEHGDESAA IKKLNALKTP ESFSTHSNFD TPGGTVYYIP KVPVDVLLAK GNVFNSVDEC  480
ISAYMKYASK AGFVVRKSCQ KRLRSGIVKQ KYLVCNREGC PKGIHVDTLD LENSDKQKRS  540
SNLHITGCKA RVMFELIPGS TKYKLTVFDS IHNHELERKE YKHLSKTESQ LTYAEQLFIV  600
KAASVNISAT RAHHLLTGLK GSYLLVHGTT FDFKNFFRSV NCYIGDSDAQ MLIAKMENRQ  660
KHVSDFSFDY LVENAELSAI FWADEVSKYN YKEFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-08	FAR1 family protein