PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030047.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 294aa MW: 34106.2 Da PI: 8.3166

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030047.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.7	3e-16	84	190	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 ++Y eYA+++ Fs+rks++k++ ng it++ C+k g ++++ k +++e+r+ + t t+Cka++k k+ Cse_sc030047.1_g040.1 84 NMYLEYAQKARFSIRKSTTKRK--NGDITHKYILCNKAGLPRKTVVKdtlvdkqlnennqkedakKTRENRNLNFTVTDCKACVKFKR 169 58************998877..999**********99988889*******9998777777888899******** PP FAR1 71 ek.dgkwevtkleleHnHela 90 + + ++++++ ++HnH+l Cse_sc030047.1_g040.1 170 IHgTPAYRLYEFTENHNHPLL 190 999**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MASNSGKNVT HGTQSHDVIQ PVNVEEAVIS DEHAQSDRSD FEGSESDDEV VPTPNGHKYR 60 IPDVPFEEKP TEDDVFDSFD EAYNMYLEYA QKARFSIRKS TTKRKNGDIT HKYILCNKAG 120 LPRKTVVKDT LVDKQLNENN QKEDAKKTRE NRNLNFTVTD CKACVKFKRI HGTPAYRLYE 180 FTENHNHPLL DENYMDLSTA KRKLDFSDKL FIHRASLSNI GPTKAHRLRV AFMGGYDKVR 240 GTPSDWKNFR RSLNKYIGPR DAQMLVDKMN DRKKHVPNFT FEYHCVNDVL DHMW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-12	FAR1 family protein