PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc029815.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 28129.6 Da PI: 9.4069 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.3 | 4.8e-29 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifss+ klye++s Cse_sc029815.1_g010.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSSRSKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 48.7 | 3.3e-17 | 82 | 148 | 9 | 75 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellle 75 + ++ ++++q +a + keie L+ +R++lGe+L+s +++eL q+eqqLe+s+ +iR++K + l + Cse_sc029815.1_g010.1 82 PCPEDVQHMRQLAADMAKEIELLEVAKRKILGEGLGSSTVEELLQIEQQLERSVCSIRARKLQPLPT 148 566789*******************************************************987755 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MVRGKTQLRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSS RSKLYEFASS 60 SMKETVERYR DHVKETRIQN SPCPEDVQHM RQLAADMAKE IELLEVAKRK ILGEGLGSST 120 VEELLQIEQQ LERSVCSIRA RKLQPLPTTI TARPPPPPPP IITHRMLVMQ VYGEKVEQLQ 180 SKEKMRRAEN AELNEKYLQM IAGAVERDGK FMDLEEEDIS DVETELFIGQ PKREIKKNQR 240 KSFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 2e-62 | MIKC_MADS family protein |