PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029764.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 418aa MW: 47315.1 Da PI: 6.5031

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029764.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.5	3.7e-11	246	290	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h e Er+RR+++N++f Lr ++P K++Ka+ L Av YI++L Cse_sc029764.1_g030.1 246 HVESERQRREKLNHRFYALRGVVPYV-----SKMDKASLLADAVTYINEL 290 8899*******************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MELLNSTTMA QSSLQTRLKF ILQNRPERWL YAIFWQACKD TYDRLVLEWA DGYFPETNYV 60 FGLDDISDTQ WLIMSSLGMC FPAGCDVVGQ CFGSRSCVWL AGDIELGKYD SKRCEEVRVH 120 GIKSLVCIPT NNGVVELGCC DVVKQDCGFI ELTKSVFDPN SLSYINFQNL IDEYEFRNQG 180 FQNQVGEGQE EVASTKKMKM SSSDSDPLEI NSSSSLTTKN TCTPKRKGRR VKGTIAQPEV 240 LAPGYHVESE RQRREKLNHR FYALRGVVPY VSKMDKASLL ADAVTYINEL KSKIQTLESD 300 KGSESSLIRP RNENQLNINQ CKHVHVQRTT GHSMANQVEV EVKLLESEAM IRVQSAEVNH 360 PACKLMDALR SLNLKVHYAS IVCVKDLMLQ DVIVKVPNGF TREEDTLQLA IFNKMCLD

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MELLNSTTMA QSSLQTRLKF ILQNRPERWL YAIFWQACKD TYDRLVLEWA DGYFPETNYV  60
FGLDDISDTQ WLIMSSLGMC FPAGCDVVGQ CFGSRSCVWL AGDIELGKYD SKRCEEVRVH  120
GIKSLVCIPT NNGVVELGCC DVVKQDCGFI ELTKSVFDPN SLSYINFQNL IDEYEFRNQG  180
FQNQVGEGQE EVASTKKMKM SSSDSDPLEI NSSSSLTTKN TCTPKRKGRR VKGTIAQPEV  240
LAPGYHVESE RQRREKLNHR FYALRGVVPY VSKMDKASLL ADAVTYINEL KSKIQTLESD  300
KGSESSLIRP RNENQLNINQ CKHVHVQRTT GHSMANQVEV EVKLLESEAM IRVQSAEVNH  360
PACKLMDALR SLNLKVHYAS IVCVKDLMLQ DVIVKVPNGF TREEDTLQLA IFNKMCLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-58	bHLH family protein