PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029201.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 657aa MW: 74407.5 Da PI: 7.1026

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029201.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.1	1.7e-07	602	645	3	44
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 W+t lv+a k ++++ +W++Ia+ ++ g+t +qck + Cse_sc029201.1_g040.1 602 EWSTVQVTSLVQAMKTFPKEanqRWERIAAAVP-GKTVNQCKKQF 645 79999***********99*********.******877 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MTAKASILQI TYSNELINGE TIYVSSNCLP VKVTRFEPAG HSFHDVALKL AGCFMEEKVE 60 DDDEINESSP KDKEPDYMQS AGSYSSSKGK KKSGDGANQQ DHYALLGLGH LRYLATEEQI 120 RKSYRDTALK HHPDKQAALL LLEKTEAAKE AKKDEIENHF KAVQEAYEYL IDPAKRRVFD 180 STDEFDDEIP TDCAPQDFFK VFGPAFLRNG KWSVTQPIPL LGDENSSIQD VDAFYDFWYS 240 FKSWREFPHE DEFDLDEAES RDHKRWMERQ NAKLSEKSRK EEYTRIRSLV DNAYKRDPRV 300 LKRKEMLKAE KQKKRESKYM AKKLQEEEAA RIAEEERIKK EEEEKQAAEA AALQKKNREK 360 EKKLLRKERT RLRTLSTSVV SQHLLNLNED DVESLCMSLD MLALQTLCDT MEAKEESEQA 420 KLLGEALGNS DRSHRDYSST NGQQNGSVKV NGNAPKSTPK KNKSWGKEEI ELLRKGMAKF 480 PKGTSRRWEV ISEYIGTGRS VEEILKATKT VLLQKPDSSK AFDTFLDKRK PAQSISSPLS 540 TREEVEGVSS NSIPVEGVSP KPSQTKNENM ANGVANGVSN GVANGVADGV ANGVNADADS 600 DEWSTVQVTS LVQAMKTFPK EANQRWERIA AAVPGKTVNQ CKKQFTLLKD KFRNKKN

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MTAKASILQI TYSNELINGE TIYVSSNCLP VKVTRFEPAG HSFHDVALKL AGCFMEEKVE  60
DDDEINESSP KDKEPDYMQS AGSYSSSKGK KKSGDGANQQ DHYALLGLGH LRYLATEEQI  120
RKSYRDTALK HHPDKQAALL LLEKTEAAKE AKKDEIENHF KAVQEAYEYL IDPAKRRVFD  180
STDEFDDEIP TDCAPQDFFK VFGPAFLRNG KWSVTQPIPL LGDENSSIQD VDAFYDFWYS  240
FKSWREFPHE DEFDLDEAES RDHKRWMERQ NAKLSEKSRK EEYTRIRSLV DNAYKRDPRV  300
LKRKEMLKAE KQKKRESKYM AKKLQEEEAA RIAEEERIKK EEEEKQAAEA AALQKKNREK  360
EKKLLRKERT RLRTLSTSVV SQHLLNLNED DVESLCMSLD MLALQTLCDT MEAKEESEQA  420
KLLGEALGNS DRSHRDYSST NGQQNGSVKV NGNAPKSTPK KNKSWGKEEI ELLRKGMAKF  480
PKGTSRRWEV ISEYIGTGRS VEEILKATKT VLLQKPDSSK AFDTFLDKRK PAQSISSPLS  540
TREEVEGVSS NSIPVEGVSP KPSQTKNENM ANGVANGVSN GVANGVADGV ANGVNADADS  600
DEWSTVQVTS LVQAMKTFPK EANQRWERIA AAVPGKTVNQ CKKQFTLLKD KFRNKKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein