PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc028113.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 305aa    MW: 34055.5 Da    PI: 7.1749
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc028113.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.5e-31163221259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +D ++WrKYGqK++kgs++pr+YYrC+++ gC+++k+ver+++dp++++itY+geH h+
  Cse_sc028113.1_g020.1 163 SDSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSARKQVERNRTDPNTLIITYTGEHSHP 221
                            79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEADWDLHAV VRGCCSTTTT ATTTTTTSQL DTYNHHSQQK STLYDNSIMD VFPDLYQPTT  60
DNSIEHFLNN LYNPLQFTNL PSQPICSQSL PVSPLSVLGG LQDPPYYQQK QQQVTQFQGK  120
QQGLSVSRCT SSNAQSTTKF KKRKNQVKSV CQVPAEGTST SSSDSWSWRK YGQKPIKGSP  180
YPRGYYRCST SKGCSARKQV ERNRTDPNTL IITYTGEHSH PMPSQRTSTS TTTRNNKNTT  240
TTTDDVTIKP TPSSPISPST TLSPVTEKTE ENDTDDDVTG NDIFNGLCEF DTIDMFSDHH  300
MMLRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.13e-35WRKY family protein