PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc027847.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28907.7 Da PI: 8.1234 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.5 | 1.2e-13 | 82 | 134 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ h e+Er+RR+++ + ++ Lr llP + ++K s ++ +Av+YIk++q Cse_sc027847.1_g010.1 82 RKLVHREIERQRRQDMAKLYASLRGLLPLEF--VKGKRSTSDHMHQAVNYIKHMQ 134 5678*************************65..*********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MFSFQQSDEL VFHQIPSLIS FQQPATNQQD LIVEDKDHVT MEGNTNKSVS KTRKRQEDQS 60 PSSSKPNSAT PDDSTKDEHT QRKLVHREIE RQRRQDMAKL YASLRGLLPL EFVKGKRSTS 120 DHMHQAVNYI KHMQDNIKEM TVKRDQLKKF VEMSVSGLGT NSNEKNLTNL LPNTVSLHSS 180 NGGIEISINS CPLEEGFPLS RILKAISKEG FKVITCTCTK VNDRLIHSIQ AEANDPVLTD 240 LSMLQQWLTV VANNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25400.1 | 1e-39 | bHLH family protein |