PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc027028.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 388aa MW: 44681.1 Da PI: 7.81 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.2 | 0.00013 | 82 | 104 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + Lk+H + H Cse_sc027028.1_g020.1 82 CSfeGCGKTFIDAGALKKHSNIH 104 77779**************9988 PP | |||||||
2 | zf-C2H2 | 13.2 | 0.00026 | 109 | 133 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ +Cgk F ++s LkrH H Cse_sc027028.1_g020.1 109 HVCHyeNCGKKFLDSSKLKRHFLIH 133 79*******************8877 PP | |||||||
3 | zf-C2H2 | 21 | 8.9e-07 | 139 | 163 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk Fs nLk+H++tH Cse_sc027028.1_g020.1 139 FICPheGCGKAFSLDFNLKSHMKTH 163 78**********************9 PP | |||||||
4 | zf-C2H2 | 15.2 | 6e-05 | 169 | 193 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp Cgk++ + + Lk+H+++H Cse_sc027028.1_g020.1 169 HICPfrECGKRYAHEYKLKKHMMSH 193 68**********************6 PP | |||||||
5 | zf-C2H2 | 13.7 | 0.00018 | 239 | 264 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C+k + + + L+ H+r+ H Cse_sc027028.1_g020.1 239 YACPydSCDKAYIHEYKLNLHLRReH 264 89*********************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence |
MEHHSFHNLF ERRPIVNKKP SKIPTVKWYK QWVPQDVVAT GGKCMVMKWV TEAQMKALKQ 60 KKENPVTAEP EPEPTTEVLF LCSFEGCGKT FIDAGALKKH SNIHGERQHV CHYENCGKKF 120 LDSSKLKRHF LIHTGERDFI CPHEGCGKAF SLDFNLKSHM KTHSQENYHI CPFRECGKRY 180 AHEYKLKKHM MSHHEKNNMA ELPSKYVNIQ VQPVEKPPPR PPKMASTATY ATASYDRPYA 240 CPYDSCDKAY IHEYKLNLHL RREHPGHLPE ENPKNTSRNK NNNNGDMDAG SDHDIYAVKR 300 GNANSQKQNR PKPNIRLPPA KVAKHKSAPA SVAIPSVAKK QLYAVAKPVH EDEDSEETEE 360 DRDDDPEDGW RYRGNDNDDD DEETDYED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 1e-122 | C2H2 family protein |