PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc027015.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 480aa MW: 54697.3 Da PI: 7.2759

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc027015.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	61.4	1.6e-19	381	428	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + e +++y+++pi++AAk+ +++ T+ K+ CR++ I+RWP+Rk++s+ Cse_sc027015.1_g010.1 381 TRREIIAQYYYMPIAKAAKKFNIGITIFKKDCRELDIQRWPYRKLRSI 428 567889***************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MFLDELKLDA SGTIVVMLCR LWDVNASTNG RYLGSDFLVS DAKGNVIHCT AKATVAHNFV 60 RLKEGSVYSV KNFVVINNND EFRIRKDDTF MLEFDGATTI RKVVVKPKGF VRYPFQLVDF 120 DHLGPTNNKY LIGYVTNVGR MNHMKTVRKN LDFYLANHRM LKVTNIVDMF LSSVESSKAV 180 SCADNSEPRP GTIENLLIWS HNRKNEPETE LVKFPAESIW QEDDETLEEH ANLPPAIANL 240 IGTTHVFEIK THTYYEYASF ESFTCWTVDQ PQPSVETASL TTVDDGSVVS CSPSRTHTKA 300 PSVVTPSKPR KDMKKRPAIE VLDAKIEMIP DDDVNPTDDN KKKRLDIEDS DAEIDMNPAD 360 DDQGEASIPI VKKKTTVRKK TRREIIAQYY YMPIAKAAKK FNIGITIFKK DCRELDIQRW 420 PYRKLRSIQL LINTIQAENG GAKVDGNTQQ IITRLQEEKK CVEENPELEF SKSTKRLRQF

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MFLDELKLDA SGTIVVMLCR LWDVNASTNG RYLGSDFLVS DAKGNVIHCT AKATVAHNFV  60
RLKEGSVYSV KNFVVINNND EFRIRKDDTF MLEFDGATTI RKVVVKPKGF VRYPFQLVDF  120
DHLGPTNNKY LIGYVTNVGR MNHMKTVRKN LDFYLANHRM LKVTNIVDMF LSSVESSKAV  180
SCADNSEPRP GTIENLLIWS HNRKNEPETE LVKFPAESIW QEDDETLEEH ANLPPAIANL  240
IGTTHVFEIK THTYYEYASF ESFTCWTVDQ PQPSVETASL TTVDDGSVVS CSPSRTHTKA  300
PSVVTPSKPR KDMKKRPAIE VLDAKIEMIP DDDVNPTDDN KKKRLDIEDS DAEIDMNPAD  360
DDQGEASIPI VKKKTTVRKK TRREIIAQYY YMPIAKAAKK FNIGITIFKK DCRELDIQRW  420
PYRKLRSIQL LINTIQAENG GAKVDGNTQQ IITRLQEEKK CVEENPELEF SKSTKRLRQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66990.1	2e-24	Nin-like family protein