PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026693.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 367aa    MW: 41772.9 Da    PI: 6.5191
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026693.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP147.68.7e-46812302134
                    TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssa............ 70 
                            agkkdrhskihT++g+RdRR+Rls+++a++fF Lqd+LGfdk+sktieWL+ ++k+ai e t++       +   +            
  Cse_sc026693.1_g060.1  81 AGKKDRHSKIHTAQGLRDRRMRLSLHIARKFFGLQDMLGFDKASKTIEWLFSKSKKAIEEVTENhksqtttQ---Svskenidrcesf 165
                            89**************************************************************76654430...1334455444433 PP

                    TCP  71 .seceaesssssasnsssg........kaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134
                             s+c   +  s       +         + +++   s +s++++++   la+esr karararertrekm+i+n
  Cse_sc026693.1_g060.1 166 fSDC---ELDSG------SefndkgkqLKVQDEIdDSGNSSRKPTESDLLARESRYKARARARERTREKMMINN 230
                            3444...22222......0222223443444444456666666666778999*******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MDYVFSSSNI ETLVSSNKEL NRENLDSNHQ EEVSIFGQFP SPFLDDIMQN HHQQHQLSSP  60
VTEAPPSPSI PKPRARKKRS AGKKDRHSKI HTAQGLRDRR MRLSLHIARK FFGLQDMLGF  120
DKASKTIEWL FSKSKKAIEE VTENHKSQTT TQSVSKENID RCESFFSDCE LDSGSEFNDK  180
GKQLKVQDEI DDSGNSSRKP TESDLLARES RYKARARARE RTREKMMINN LERAKHVFGE  240
NRNDNFDQVQ LGFPTNPNNN YIEESSSSPL EYTSTHHFFE HTPLENSSQK TEDYLGTTSA  300
SSSTYLSGYG YNKNFANPPA GWLNSSNTFL GFLGGWDSGN FTENYGLLPN IASSTEYLIY  360
ASEVQFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-28TCP family protein