PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc026314.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 559aa MW: 65608.5 Da PI: 9.2552

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc026314.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.5	9.5e-23	57	149	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtklele 84 fY+++Ak+ GFs++ + +++ +nge t+r+f+C +egk++++ + +k +r+++++++gCka +++++++ ++w+vt l+le Cse_sc026314.1_g010.1 57 FYQNFAKKNGFSIVHGRFNNN-KNGEKTRRDFYCHREGKPKPKMVDYSKVQRNQTSSKCGCKAYMRITLRReneifPEEWQVTILNLE 143 9*************99988.8888****************99***************999864455579***** PP FAR1 85 HnHela 90 HnHel Cse_sc026314.1_g010.1 144 HNHELL 149 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MHNKVSFDLN EIPIDSDSIN IDQNEIIFGE DEQIMQDALD KPFVGQYFLS EEEAFAFYQN 60 FAKKNGFSIV HGRFNNNKNG EKTRRDFYCH REGKPKPKMV DYSKVQRNQT SSKCGCKAYM 120 RITLRRENEI FPEEWQVTIL NLEHNHELLS MDEVRFLPSY RSVTTEDEKR ILLLKEGGLS 180 IRQIMRVMEL EKNKFVLLMT KTPNTILNDQ DPWITEAIAK EMPSTKHAFC IWHITAKFSG 240 WFISILRGNY SSWCSEFYSL YKLDTIEEFE KQWPLVIANY DLGENKHING LYHIKKFWVP 300 AYLREFIFGG MTTTGRSESI NAFIKRFISS NTRLTQFIRQ VHLAIEDIQQ KQIHDTMLVK 360 YKGSYLISQS PLEEQGYHFL LTLHLKSFER SLDEQFNTRL WKKRHHKDIQ YNKHEVVWDG 420 ILCRHILSVF LHKDCFDIPL AYLLSRWSRK EVTLSQEVLF ENSTSMNNDE VSTEVIKLVQ 480 RPPKSKPKGR PKQRMKGGIE LAKKVHSCSL CKGVGHNIST CPMKEELVGK SNGISRRAAK 540 KKKIMLENQD LNPIFSLKY

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MHNKVSFDLN EIPIDSDSIN IDQNEIIFGE DEQIMQDALD KPFVGQYFLS EEEAFAFYQN  60
FAKKNGFSIV HGRFNNNKNG EKTRRDFYCH REGKPKPKMV DYSKVQRNQT SSKCGCKAYM  120
RITLRRENEI FPEEWQVTIL NLEHNHELLS MDEVRFLPSY RSVTTEDEKR ILLLKEGGLS  180
IRQIMRVMEL EKNKFVLLMT KTPNTILNDQ DPWITEAIAK EMPSTKHAFC IWHITAKFSG  240
WFISILRGNY SSWCSEFYSL YKLDTIEEFE KQWPLVIANY DLGENKHING LYHIKKFWVP  300
AYLREFIFGG MTTTGRSESI NAFIKRFISS NTRLTQFIRQ VHLAIEDIQQ KQIHDTMLVK  360
YKGSYLISQS PLEEQGYHFL LTLHLKSFER SLDEQFNTRL WKKRHHKDIQ YNKHEVVWDG  420
ILCRHILSVF LHKDCFDIPL AYLLSRWSRK EVTLSQEVLF ENSTSMNNDE VSTEVIKLVQ  480
RPPKSKPKGR PKQRMKGGIE LAKKVHSCSL CKGVGHNIST CPMKEELVGK SNGISRRAAK  540
KKKIMLENQD LNPIFSLKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	9e-53	FAR1 family protein