PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc026227.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 259aa    MW: 29568.3 Da    PI: 7.8434
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc026227.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12.1e-10896194
                           EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                     B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89
                           ffkvl   d ++ + l lp +f++++ ++k  +++ ++++ +g   We+k+  +k ++ y +  GW + vk+  L  gDf+vF l++  +
  Cse_sc026227.1_g030.1  8 FFKVL--VDPFAPN-LPLPPDFVTRYFKNK-IPTDPIIQSVDGeYAWELKI--KKVGEIYCFDHGWHNVVKDAALGYGDFIVFWLVDACT 91
                           66777..6666766.99*********6553.777889999888789*****..999999*************************999888 PP

                           E..EE CS
                     B3 90 felvv 94
                           f+++v
  Cse_sc026227.1_g030.1 92 FKMLV 96
                           86554 PP
2B351.12.4e-161402161490
                            T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                             rl+lp +f+   g+++ e+  ++++d++g++W +  + +k+ +   y+l++GW++F ++n+L+egD +vFk++ ++++
  Cse_sc026227.1_g030.1 140 VRLRLPGEFV-GLGKIEGEG-PIMMKDLDGKEWPMVARLDKSYKVerYYLARGWRGFRRSNDLQEGDECVFKFITSERK 216
                            4689*****9.676665554.7***************9966655455*************************9975554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MQKMSPSFFK VLVDPFAPNL PLPPDFVTRY FKNKIPTDPI IQSVDGEYAW ELKIKKVGEI  60
YCFDHGWHNV VKDAALGYGD FIVFWLVDAC TFKMLVFSSD GCEKDLPPKV KVEDYGDGLV  120
QYDNGDDPMF KTIIIKSHEV RLRLPGEFVG LGKIEGEGPI MMKDLDGKEW PMVARLDKSY  180
KVERYYLARG WRGFRRSNDL QEGDECVFKF ITSERKICLA KVTKKKRLPV QPPPPGGVPT  240
TGVMTGQLPD QQDARVIYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.14e-14B3 family protein