PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc025888.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | TCP | ||||||||
Protein Properties | Length: 241aa MW: 26625.2 Da PI: 7.0153 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 127.4 | 1.5e-39 | 41 | 189 | 3 | 114 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg. 88 k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s + s+s+ s+g Cse_sc025888.1_g020.1 41 QKRPTTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRGSGSTISAGh 128 68999***************************************************************88875555555555333334 PP TCP 89 ...................................kaaksaakskksqksaasalnlakes 114 + a+s +++++++ ++s++n++++s Cse_sc025888.1_g020.1 129 ssylrngfnlvtnhptsnmldfespvldprgihmgHVASSYMTQSSNSFTSNSTWNFSNNS 189 4456666667776777777777777777777777644444444444444444555655555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MENDHQNYFQ RPNYPLQLLE QRSGDDEIVE LQQQTKPKPQ QKRPTTKDRH TKVDGRGRRI 60 RMPAICAARV FQLTRELGHK SDGETIEWLL QQAEPSVIAA TGTGTIPANF TSLNISLRGS 120 GSTISAGHSS YLRNGFNLVT NHPTSNMLDF ESPVLDPRGI HMGHVASSYM TQSSNSFTSN 180 STWNFSNNSN NSGLHFMNFG TQMGHLHGLQ FDGGAVAETG GSNQGDHYDH QQPETSSSSH 240 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58100.1 | 5e-46 | TCP family protein |