PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025735.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 327aa    MW: 37444.6 Da    PI: 4.7182
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025735.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1263.2e-39111162106
                    NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkat 86 
                            ppGfrFhPtdeelv +yL+kk++++k++l +v++++d+y++ePwdL +  ++   e++ewyfFs++dkky+tg+r+nrat +g+Wkat
  Cse_sc025735.1_g020.1  11 PPGFRFHPTDEELVGYYLRKKIASQKIDL-DVVRDIDLYRIEPWDLIErcRIGYeEQTEWYFFSHKDKKYPTGTRTNRATMAGFWKAT 97 
                            9****************************.99**************743433332667****************************** PP

                    NAM  87 gkdkevlskkgelvglkktL 106
                            g+dk+v++ k +l+g++ktL
  Cse_sc025735.1_g020.1  98 GRDKAVYE-KLRLIGMRKTL 116
                            ********.999*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDTMDHSSCI PPGFRFHPTD EELVGYYLRK KIASQKIDLD VVRDIDLYRI EPWDLIERCR  60
IGYEEQTEWY FFSHKDKKYP TGTRTNRATM AGFWKATGRD KAVYEKLRLI GMRKTLEEGW  120
VVCRAFKKRS TGQTKHAEGW EANLFYDDTN RVSPAIEVND YITSKPPSSI FSQSFMCKQE  180
LEAAENLNFV YCDQFIQLPQ LKSPSLPTIK RPSSVSLASS SENDDLEDDL PSRGRNISNN  240
NGDDNNVSYT NNTSKVTDWR ALDKFVASQL SQEDQYGLGE GLSSNFGEKE NSDLADMFME  300
GAREDEDGEG AEKLNAWVLE FSKSRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-112NAC family protein