PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc025084.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 183aa MW: 21450.6 Da PI: 9.8327 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+++Ed++l +++ +G g+W++I+ + g+ R++k+c++rw +yl Cse_sc025084.1_g010.1 15 RGLWSPDEDQKLREYIMNHGLGCWSLIPIHAGLQRSGKSCRLRWINYL 62 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.6 | 3.4e-14 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+ +T Ed++++ ++ +lG++ W+ I++++ gRt++++k+rw++yl Cse_sc025084.1_g010.1 68 RDTFTFHEDDIILTLHGMLGNK-WSQISQHLL-GRTDNEIKNRWHSYL 113 7899******************.********9.************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
MRASPSEKPK LKHKRGLWSP DEDQKLREYI MNHGLGCWSL IPIHAGLQRS GKSCRLRWIN 60 YLRPGLKRDT FTFHEDDIIL TLHGMLGNKW SQISQHLLGR TDNEIKNRWH SYLKKKVDKQ 120 TNSSLESSEA YGCRKLPKIL FADWLCEKGK GDDAFRLFDE IKMVNDFVNS WDVCNSILDS 180 FRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48920.1 | 2e-52 | MYB family protein |