PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024938.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 487aa MW: 54147.6 Da PI: 6.6813

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024938.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	7.2e-32	180	237	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkver+ +++++ei+Y+g+H h+k Cse_sc024938.1_g030.1 180 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERNL-EGHITEIVYKGNHSHSK 237 8**************************************.*************85 PP
2	WRKY	105.8	2.3e-33	325	383	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d ++v++tYeg+Hnh+ Cse_sc024938.1_g030.1 325 LDDGYRWRKYGQKVVKGNPNPRSYYKCTFVGCPVRKHVERASHDLRAVITTYEGKHNHD 383 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MASSGGSLNN TSTTTSQYPS FSFSTTSFSD LIASNNNNNN NTNNSNQDSS WGFFGANDSP 60 KIPFSPSAFL STPTGLNQNQ FLDSPFFPFN SNIVPSPTTG SFSSLDYKDD ETKYSNFSFQ 120 PHATNKMEEQ VKSQPQEWSM TKQTDFISGI NKTKSESVQS VQNQYVSDQS QATRDQTRLE 180 DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVERNL EGHITEIVYK GNHSHSKPQN 240 AKKSSSNTFY EAPVESNHVD SSASFGEDDF EQASSMSKSG DDHENEPEAK RWKGETESEA 300 ISGPGSRTVR EPRIVVQTTS DIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTFVGCPVRK 360 HVERASHDLR AVITTYEGKH NHDVPAPRGS GSYAINRPPT TTNGNTNNNY GLMAIRPSAN 420 YSSNIQSTTG LTDNGSQPPY TLQMLQNNGN YGIPEGSYMN QNQGKDGSLS SAKEEPTDDL 480 FYNSYLG

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MASSGGSLNN TSTTTSQYPS FSFSTTSFSD LIASNNNNNN NTNNSNQDSS WGFFGANDSP  60
KIPFSPSAFL STPTGLNQNQ FLDSPFFPFN SNIVPSPTTG SFSSLDYKDD ETKYSNFSFQ  120
PHATNKMEEQ VKSQPQEWSM TKQTDFISGI NKTKSESVQS VQNQYVSDQS QATRDQTRLE  180
DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVERNL EGHITEIVYK GNHSHSKPQN  240
AKKSSSNTFY EAPVESNHVD SSASFGEDDF EQASSMSKSG DDHENEPEAK RWKGETESEA  300
ISGPGSRTVR EPRIVVQTTS DIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTFVGCPVRK  360
HVERASHDLR AVITTYEGKH NHDVPAPRGS GSYAINRPPT TTNGNTNNNY GLMAIRPSAN  420
YSSNIQSTTG LTDNGSQPPY TLQMLQNNGN YGIPEGSYMN QNQGKDGSLS SAKEEPTDDL  480
FYNSYLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-119	WRKY family protein