PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024852.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family AP2
Protein Properties Length: 805aa    MW: 90071.2 Da    PI: 7.1934
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024852.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.7e-142273155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           + y+GVr + k  +Wv+e+r+p     +  r++lg++  ae+Aa+a++ a ++++g
  Cse_sc024852.1_g010.1 22 PVYRGVRSRDKGRKWVCEVRHPI----TqSRIWLGTHPNAEMAARAHDVAVLAMRG 73
                           68****99998999*******72....46*************************98 PP
2AP245.12.5e-14271322155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr + k  +Wv+e+r+p     +  r++lg++  ae+Aa+a++ a ++++g
  Cse_sc024852.1_g010.1 271 PVYRGVRSRDKGRKWVCEVRHPI----TqSRVWLGTHPNAEMAARAHDVAVLAMRG 322
                            68****99998999*******72....46*************************98 PP
3AP244.92.9e-14426477155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr + k  +Wv+e+rdp     +  +++lg++  ae+Aa+a++ a ++++g
  Cse_sc024852.1_g010.1 426 PVYRGVRSRDKGRKWVCEVRDPI----TqSSVWLGTHPNAEMAARAHDVAVLAMRG 477
                            68****99998999*******82....46*************************98 PP
4AP245.22.4e-14715765155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr +  +g+Wv+e+r+p     +  r++lg++  ae+Aa+a++ a ++++g
  Cse_sc024852.1_g010.1 715 PVYRGVRSRG-KGKWVCEVRHPI----TqSRVWLGTHPNAEMAARAHDVAVLAMRG 765
                            68*****888.7*********72....46*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 805 aa     Download sequence    
MLASENPKKR GGRKKFKETR HPVYRGVRSR DKGRKWVCEV RHPITQSRIW LGTHPNAEMA  60
ARAHDVAVLA MRGPKYACLN FADSVWRLPV PESNDVADIQ KAAAQAAEAF RHTKPEVVMD  120
YYMNEDELPG FLDSMAEALM LPPPQSVVGY GNLFDDVESC ADMSLWNFEV FCYPRVPYEA  180
EDCPRGGHPM DDARMTRDLN FLGLPDAWKT PCTIVIKSYN SFPSSSSSTE TPLTCTDGSG  240
SFSSELEVLM LASENPKKRA GRKKFKETRH PVYRGVRSRD KGRKWVCEVR HPITQSRVWL  300
GTHPNAEMAA RAHDVAVLAM RGPKHACLNF ADSAAAEAAE AFRHTKPEVA MDYYMNEDEL  360
PGFLDSMAEA LMLPPPHSFV GYGSNIFDDV ESCADIFSSE LEVLMLASEN PKKRGGRKKF  420
KETRHPVYRG VRSRDKGRKW VCEVRDPITQ SSVWLGTHPN AEMAARAHDV AVLAMRGPKY  480
ACLNFADSVW RLPVPESNDV ADIQKAAAEA AEAFRHTKPE VAMDYYMNED ELPWFLDSMA  540
EALMLPPPQS FVGYGTHPNA EMAARAHDVA VLAMRGPKYA CLNFADSVWR LPVPESNHVA  600
DIQKAAAQAA EAFQHTKPEV AMDYYMNEDE LPGFLDSMAE ALMLPPPQSV VGYGNLFDDN  660
ESYNSFPSSS SSTETPLTST DGSGSFSSEL EVLMLATENP KKRAGRKKFK ETRHPVYRGV  720
RSRGKGKWVC EVRHPITQSR VWLGTHPNAE MAARAHDVAV LAMRGPKYAC LNFADSVWRL  780
PVPESNHILH ILKNKKTNHY SNDNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.14e-48ERF family protein