PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024791.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HD-ZIP
Protein Properties Length: 758aa    MW: 83594.3 Da    PI: 6.2356
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024791.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox665.1e-212883156
                           TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
               Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                           +++ +++t++q++e+e+lF++n++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  Cse_sc024791.1_g030.1 28 KKRYHRHTAHQIQEMEALFKENPHPDDKRRMRLSQELGLKPRQVKFWFQNRRTQMK 83
                           688999***********************************************998 PP
2HD-ZIP_I/II63.64.7e-2131115387
            HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87 
                             +r +++q++ +E  F+e+ + + +r+++l++eLgl+prqv+ WFqnrR  +k++q  +d + L++  d+l++en+rL++  ++L
  Cse_sc024791.1_g030.1  31 YHRHTAHQIQEMEALFKENPHPDDKRRMRLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNAILRNDNDNLRNENSRLQNALRSL 115
                            3477899************************************************************************998887 PP
3START144.59.9e-462314553206
                            HHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S CS
                  START   3 aeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla 77 
                            a++ ++e+vk+  ++ep+W  +   + g+evl  +e +k               s ea+ras+vv+ ++ +lv  +ld + +W e ++
  Cse_sc024791.1_g030.1 231 ALSFMDEVVKMCRLGEPLWIPVN--DAGKEVLNFEEHAKMfpspltrksdlngLSFEASRASTVVIINSITLVVAFLDAA-KWMELFP 315
                            67889***************999..8888888877777778888889999999***************************.******* PP

                            ....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEE CS
                  START  78 ....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgil 153
                                +a+tl+vi+sg      + lqlm+aelq lsplvp R+  f+Ry+ + ++ g+w+i d  +ds  +   ++s+ R +++pSg++
  Cse_sc024791.1_g030.1 316 siisRAKTLQVITSGvdgtadASLQLMYAELQTLSPLVPtREIHFLRYCARnSENGSWAIIDFPLDSFHETY-QPSLTRYKRRPSGCI 402
                            ***************************************************9**********9999988877.9************** PP

                            EEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                  START 154 iepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                            i++++ng+s+vtwveh+  ++ l+h ++   v+sg+a+ga++w+a lqrqce+
  Cse_sc024791.1_g030.1 403 IQDMPNGYSRVTWVEHAVAEKELVHGIFTDHVSSGMAFGARRWLAVLQRQCER 455
                            ***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
GSGSDQVEGG LSGNEQDIDP QQPPNKKKKR YHRHTAHQIQ EMEALFKENP HPDDKRRMRL  60
SQELGLKPRQ VKFWFQNRRT QMKAQQDRSD NAILRNDNDN LRNENSRLQN ALRSLVCSNC  120
GGSSISFDEQ QLRMENARLK EELDRVCAIT SQFCGNNPMQ AHGQGHLPPL MTSNLNLDMN  180
MYPTPYDQEG MPNCNDMMQI NPLMVTEGHN FAAANGLIIM DEEKPIAANF ALSFMDEVVK  240
MCRLGEPLWI PVNDAGKEVL NFEEHAKMFP SPLTRKSDLN GLSFEASRAS TVVIINSITL  300
VVAFLDAAKW MELFPSIISR AKTLQVITSG VDGTADASLQ LMYAELQTLS PLVPTREIHF  360
LRYCARNSEN GSWAIIDFPL DSFHETYQPS LTRYKRRPSG CIIQDMPNGY SRVTWVEHAV  420
AEKELVHGIF TDHVSSGMAF GARRWLAVLQ RQCERLASLM ARNISDIGAI PSPEARRNLM  480
NLAQRMLRMF SLHITSSCGQ SWTALSDSVE DTVRITTRKV TEPGQPNGLI LTAVSTTWLP  540
HHHSQVFDLL RDERRRSQLD ILSNGNPLQE VAHIANGSHP GNSISLLRVN VASNSSQNVE  600
LVLQESCTDD SGSLVVYSIV NVDDIKLTMN GENPSCIALL PHGFVITPVT QNPNGDINTT  660
ESGGGCLLTV GLQLLANSLP TAKLNLSSAN TVNNHIQTTV QQIINALGGI ATNTNTSTSN  720
TANSASVASA DDGDIVVGGF DQPPTPVPTE SSPTSKVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein