PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024769.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 289aa    MW: 33096.3 Da    PI: 7.9638
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024769.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.62.5e-28147206159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs  d+++v+ tYegeHnh+
  Cse_sc024769.1_g030.1 147 VNDGYKWRKYGQKVTRDNPYPRAYFKCSYApTCPVKKKVQRSIYDQTIVVATYEGEHNHQ 206
                            58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MEYRSSSLVH TSLDLNSFPN YLPANQELQT MFNGYESNII PPAKDEEVGD LTRELHRVNL  60
ENENLMKMVK EMYRDYNLLQ KRLSDYMIKN PPQADKQKSD TLISEDSNSN SSYENTCKNP  120
IKYQQQTRPK ISKVFVRVEA LDNSFVVNDG YKWRKYGQKV TRDNPYPRAY FKCSYAPTCP  180
VKKKVQRSIY DQTIVVATYE GEHNHQYPSR HELVMSSCLN HIVTNDSPRL AIPTITLDLT  240
TTPIKSGSHI ETQMALQQFL VDQMTSSLTK DPSFKASVAS AISGQIAES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-56WRKY family protein