PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc024606.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 505aa MW: 56674 Da PI: 8.3101

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc024606.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.4e-15	214	261	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++++G+g+W+ ++ g+ R+ k+c++rw +yl Cse_sc024606.1_g010.1 214 KGPWTPEEDITLVTYIQEHGPGNWRFVPTNTGLPRCSKSCRLRWTNYL 261 79****************************99**********97 PP
2	Myb_DNA-binding	48.5	2.1e-15	267	312	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ +v++ ++lG++ W++Ia++++ Rt++++k++w+++l Cse_sc024606.1_g010.1 267 RGNFTDHEEKMIVHLQELLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 312 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MWCVIPLLTY ALGLGFRLVD IGLCGDRDKS LRPDDILLYS WDGGQDAFVD LTWSSPLTQT 60 NVVDFAPGHV VVEAAQRKRV KYDAKCADID FRLLPFSFSS FGELEKDAVT LLKRIRSFSL 120 TQEIGARAAE HIFSRISFSI ARGVGAQLAA QRKRAKYEAK CVNIGYGFLP FSFSSFGELE 180 KDAVTMLKRI RKTHSTEEGE MGRPPCCDKI GVKKGPWTPE EDITLVTYIQ EHGPGNWRFV 240 PTNTGLPRCS KSCRLRWTNY LRPGIKRGNF TDHEEKMIVH LQELLGNRWA AIASYLPQRT 300 DNDIKNYWNT HLKKKLVNFR TNQDGASTSS SSSDATTGAK GQWEKKLRTN VFMAKQALSD 360 ALSVDTKSTT SWQHAPHNTP TAPINHQPEL PLMQPRSLNT TNYALSAKNI ARMLPNWEKN 420 SSKSPQASSD SINTSNQQFQ SHPTSEGLKN YNNSEVSETT SLLQDGSKPD MESLGFLEKC 480 LFDDTVSEGY DRFMNISLEE GDALF

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MWCVIPLLTY ALGLGFRLVD IGLCGDRDKS LRPDDILLYS WDGGQDAFVD LTWSSPLTQT  60
NVVDFAPGHV VVEAAQRKRV KYDAKCADID FRLLPFSFSS FGELEKDAVT LLKRIRSFSL  120
TQEIGARAAE HIFSRISFSI ARGVGAQLAA QRKRAKYEAK CVNIGYGFLP FSFSSFGELE  180
KDAVTMLKRI RKTHSTEEGE MGRPPCCDKI GVKKGPWTPE EDITLVTYIQ EHGPGNWRFV  240
PTNTGLPRCS KSCRLRWTNY LRPGIKRGNF TDHEEKMIVH LQELLGNRWA AIASYLPQRT  300
DNDIKNYWNT HLKKKLVNFR TNQDGASTSS SSSDATTGAK GQWEKKLRTN VFMAKQALSD  360
ALSVDTKSTT SWQHAPHNTP TAPINHQPEL PLMQPRSLNT TNYALSAKNI ARMLPNWEKN  420
SSKSPQASSD SINTSNQQFQ SHPTSEGLKN YNNSEVSETT SLLQDGSKPD MESLGFLEKC  480
LFDDTVSEGY DRFMNISLEE GDALF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-91	MYB family protein