PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024088.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 250aa    MW: 27697.5 Da    PI: 9.4027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024088.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.8e-20109158255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                             y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa+a+++a+ +++g
  Cse_sc024088.1_g050.1 109 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDKAAIEFRG 158
                            59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MQRMMIRRPK EETSAAMRRL TSEEEATVMV NVLKNVISGN DSSSTSLRTL LPTQLSVPVF  60
PVPVTGTDNC AVCKINGCLG CKLFSDDMNL GYNGGGSGAG GPIKKKKKNY RGVRQRPWGK  120
WAAEIRDPRK AARVWLGTFE TAEAAARAYD KAAIEFRGPR AKLNFAFSDY TTSTLPENSQ  180
PVAVAPTNNR KNTKVNNTKV VVKETKPIVE NDFLETIGED DIQEWMMMMM DFKFNDDSSD  240
STFSGNVYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.14e-32ERF family protein