PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc024073.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 294aa    MW: 33365.8 Da    PI: 6.8846
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc024073.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA565.4e-18189223135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  Cse_sc024073.1_g030.1 189 CTHCSSEKTPQWRTGPLGPKTLCNACGVRYKSGRL 223
                            *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDIYTMSSSG HQDYSTVDEL LDFSNDDDHN NNNTFSPSNN DVILHQHHNN MTSSSSNNTF  60
NYNYNSNNEN NNYDFATAYN HSTNFTDELC VPSDDVAELE WLSNFVHDSF SNFPANNMAG  120
TINYRPENTS FHSRSRTKRT RAPTHNHHNG TTTTAWTSSS TTAVKIEAYS SPTSSSSDNT  180
TEGGIVRRCT HCSSEKTPQW RTGPLGPKTL CNACGVRYKS GRLVPEYRPA ASPTFVLTQH  240
SNSHRKVMEL RRQKEMMIGQ PQQSTASEYQ LYGNGHQSYH HHHQHHNRNN YEVC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134139RSRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.11e-71GATA family protein