PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023972.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 855aa MW: 96602.3 Da PI: 7.3692

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023972.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27.1	1.4e-08	62	99	2	39
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 fYneYAk+vGF++ +++s++sk + ++ + ++vC +g Cse_sc023972.1_g020.1 62 FYNEYAKRVGFTTLVNQSTQSKSDATVGRLDYVCAASG 99 **********************************9988 PP
2	FAR1	26.8	1.7e-08	101	130	61	90
FAR1 61 gCkaklkvkkekdgkwevtkleleHnHela 90 gC+a+l+++ +++++w+vtk+ ++HnH+l+ Cse_sc023972.1_g020.1 101 GCNAMLRIESNSQNNWVVTKFMTDHNHPLT 130 8***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 855 aa Download sequence
MDVGLMSVEE KIMGQHGVSF HRFDDINGGS DPAGISTPHD KNMETKPHVG LEFAYADAAK 60 TFYNEYAKRV GFTTLVNQST QSKSDATVGR LDYVCAASGD GCNAMLRIES NSQNNWVVTK 120 FMTDHNHPLT NARKVNHHRQ KRQLSGATKN TSESYPMIGV VPNGVMYQSR SVSMESNRGV 180 QNPGTNSVKH ATSKRSLGRD AQNLLDYFRK MQAENPGFYY AIQLDDDNRM ANVFWADARS 240 RTAYSHFSDA VTLDTIYRVK HFKVPFAPFT GINHHGQTVL FGCALLLDES ECTFTWLFKT 300 FLAAMGDRAP VSIITDAEKS VQAAVANVFP GTRHCISKWH VLREGHERLA HVCHMHPNFQ 360 GELYNCINMT STIDEFESAW DFILDRYDLR SDDWLQMLYA MRQQWVPAYF RDTFFAGIFL 420 NQGFESSFFD GYVNEHTTVP LFFRQYERAL ENSFEKEIEL DFDTICTAPA LKTPSPMEKQ 480 AANLYTKTIF SKFQEELVET FVYTANRIDG DGAVSTFRVA KFEEDQKSYI VSLNVGELRA 540 YCSCQMFEHS GILCRHILTV FTVTNVLTLP SQYILKRWTR DAKCDYSLEF VKGHEPELLG 600 IRYNQLIRKA IRFAEEGAVA QDTFSLAMAY LREGGKKVAA AKTNVANFAP RSSRVSVVGY 660 DNRKTGSSTH DMTPLLWPRQ DEVTRRFNLS DGDHLAQPVA DLNLPRMAPV SVRRDDGQPD 720 NTVILPCLKS MTWVMKNRNL PPANRAAVIN LKLQDYRRTP ASESEVKLQL SAVTLEPMLK 780 SMAAINEELS APANKLAFIS LKLQDPDGTT GESEVKFQVS RDTLGAMLRS MAYIREQLSN 840 TAESPSEIQS KRPRK

Sequence ? help Back to Top

Protein Sequence Length: 855 aa Download sequence

MDVGLMSVEE KIMGQHGVSF HRFDDINGGS DPAGISTPHD KNMETKPHVG LEFAYADAAK  60
TFYNEYAKRV GFTTLVNQST QSKSDATVGR LDYVCAASGD GCNAMLRIES NSQNNWVVTK  120
FMTDHNHPLT NARKVNHHRQ KRQLSGATKN TSESYPMIGV VPNGVMYQSR SVSMESNRGV  180
QNPGTNSVKH ATSKRSLGRD AQNLLDYFRK MQAENPGFYY AIQLDDDNRM ANVFWADARS  240
RTAYSHFSDA VTLDTIYRVK HFKVPFAPFT GINHHGQTVL FGCALLLDES ECTFTWLFKT  300
FLAAMGDRAP VSIITDAEKS VQAAVANVFP GTRHCISKWH VLREGHERLA HVCHMHPNFQ  360
GELYNCINMT STIDEFESAW DFILDRYDLR SDDWLQMLYA MRQQWVPAYF RDTFFAGIFL  420
NQGFESSFFD GYVNEHTTVP LFFRQYERAL ENSFEKEIEL DFDTICTAPA LKTPSPMEKQ  480
AANLYTKTIF SKFQEELVET FVYTANRIDG DGAVSTFRVA KFEEDQKSYI VSLNVGELRA  540
YCSCQMFEHS GILCRHILTV FTVTNVLTLP SQYILKRWTR DAKCDYSLEF VKGHEPELLG  600
IRYNQLIRKA IRFAEEGAVA QDTFSLAMAY LREGGKKVAA AKTNVANFAP RSSRVSVVGY  660
DNRKTGSSTH DMTPLLWPRQ DEVTRRFNLS DGDHLAQPVA DLNLPRMAPV SVRRDDGQPD  720
NTVILPCLKS MTWVMKNRNL PPANRAAVIN LKLQDYRRTP ASESEVKLQL SAVTLEPMLK  780
SMAAINEELS APANKLAFIS LKLQDPDGTT GESEVKFQVS RDTLGAMLRS MAYIREQLSN  840
TAESPSEIQS KRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein