PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023947.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 386aa MW: 43606.1 Da PI: 4.973

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023947.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.5	3.9e-51	18	145	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l+pGfrFhPtdeelv +yL++kv g ++++ ++++++d+yk+ePw+L +++k++++ewyfFs+ d+ky +g+r nrat +gyWkat Cse_sc023947.1_g020.1 18 LAPGFRFHPTDEELVRYYLRRKVCGLPFRF-QAVSDIDVYKSEPWELAgySSLKTRDQEWYFFSPVDRKYVSGSRLNRATGNGYWKAT 104 579***********************99.88**********85448888999************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++v + k++++glkktLvf+ grap+g++t+Wvmheyrl Cse_sc023947.1_g020.1 105 GKDRAVRH-KSQTIGLKKTLVFHGGRAPEGKRTNWVMHEYRL 145 ****.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MSQEQQMMVV SPSPVTSLAP GFRFHPTDEE LVRYYLRRKV CGLPFRFQAV SDIDVYKSEP 60 WELAGYSSLK TRDQEWYFFS PVDRKYVSGS RLNRATGNGY WKATGKDRAV RHKSQTIGLK 120 KTLVFHGGRA PEGKRTNWVM HEYRLADEEL VRDGVAQDAF VLCRIFQKSG LGPPTGDRYA 180 PFLEEEWADD ATLLVPGGEA EDDMTTGEES QPHANDIVQE AAANIIALRS DPMMEHQTIP 240 FLCKRERSED GVVDCKPELE TISLFHNKKL KLEEPNTNGN GSEDSTMSQD PITSSALVEF 300 PLLQSFEAKE SQPSSSQPSF DSATLEKSVP PGYLKFINNL EKEILTVSME KESLKIELMR 360 AQAMIDILQS QINELTRENV DLKRGK

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MSQEQQMMVV SPSPVTSLAP GFRFHPTDEE LVRYYLRRKV CGLPFRFQAV SDIDVYKSEP  60
WELAGYSSLK TRDQEWYFFS PVDRKYVSGS RLNRATGNGY WKATGKDRAV RHKSQTIGLK  120
KTLVFHGGRA PEGKRTNWVM HEYRLADEEL VRDGVAQDAF VLCRIFQKSG LGPPTGDRYA  180
PFLEEEWADD ATLLVPGGEA EDDMTTGEES QPHANDIVQE AAANIIALRS DPMMEHQTIP  240
FLCKRERSED GVVDCKPELE TISLFHNKKL KLEEPNTNGN GSEDSTMSQD PITSSALVEF  300
PLLQSFEAKE SQPSSSQPSF DSATLEKSVP PGYLKFINNL EKEILTVSME KESLKIELMR  360
AQAMIDILQS QINELTRENV DLKRGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	7e-95	NAC family protein