PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc023306.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GATA | ||||||||
Protein Properties | Length: 213aa MW: 23554.7 Da PI: 8.8102 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.3 | 1.9e-17 | 142 | 176 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + Tp+WR gp+g+ktLCnaCG++y++ +l Cse_sc023306.1_g030.1 142 CTHCLSQRTPQWRAGPQGPKTLCNACGVRYKSGRL 176 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MDFCHNISNY PPEQHLLCSL DDILSGHSME QGDVDMEWLS NFVEDCLSSS GNCMSPLVKP 60 QSTTSNAQGT TNTTAQPKPK VKEPNSILQL VVPCKARSKR KRSPTCWLAE TGLIFPKKCT 120 TVYSTSDVQD ESSNGQAQGR KCTHCLSQRT PQWRAGPQGP KTLCNACGVR YKSGRLLPEY 180 RPAKSPTFVT HKHSNSHKKV LEMRSSSTTS FSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 8e-44 | GATA family protein |