PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022492.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 396aa MW: 43613.4 Da PI: 4.2281

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022492.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.8	5.4e-18	100	151	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykG+r+++ +g+++Ae+ p + kr+r++lg+f+t+eeAa a+++a+ +l+g Cse_sc022492.1_g010.1 100 TRYKGIRRRP-WGKFAAEVTNP---KkKRTRVWLGTFDTPEEAALAYDKAAFELYG 151 68******.***5554...5467**********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MAFQTFSSDH NDPISATDWV NMEEPHLPEN LIQDVHDILQ SFPTGNITED TSLTTNGGSL 60 SPENDSVDAV QQTQVAPKSA KIKKMKTSAR GKNAPAVDWT RYKGIRRRPW GKFAAEVTNP 120 KKKRTRVWLG TFDTPEEAAL AYDKAAFELY GSKAKLNFPL LIRVEDQVTN VAAKVAQSLE 180 LPKHVPSTST SSSTSARKRE RKRQKKNEAD PVVEPTTTTT SGSLEDGGSE CDSLWNFDSD 240 TLIPENFMST GVGEPRIDAA VEVVDLDLNW EFDTNTLSLE HLLAEGVAEP ASAASMDVAE 300 DLSWDVLLDN IVEPPMTTGE QLEVVGTSDS PLEIDIDTSI FENMFGEDMV EEPSIAASIM 360 APESGGDHHW LWNCQMDMVK PPSYSYATSI TEEVVW

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MAFQTFSSDH NDPISATDWV NMEEPHLPEN LIQDVHDILQ SFPTGNITED TSLTTNGGSL  60
SPENDSVDAV QQTQVAPKSA KIKKMKTSAR GKNAPAVDWT RYKGIRRRPW GKFAAEVTNP  120
KKKRTRVWLG TFDTPEEAAL AYDKAAFELY GSKAKLNFPL LIRVEDQVTN VAAKVAQSLE  180
LPKHVPSTST SSSTSARKRE RKRQKKNEAD PVVEPTTTTT SGSLEDGGSE CDSLWNFDSD  240
TLIPENFMST GVGEPRIDAA VEVVDLDLNW EFDTNTLSLE HLLAEGVAEP ASAASMDVAE  300
DLSWDVLLDN IVEPPMTTGE QLEVVGTSDS PLEIDIDTSI FENMFGEDMV EEPSIAASIM  360
APESGGDHHW LWNCQMDMVK PPSYSYATSI TEEVVW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	124	RRRPWGKFAAEVTNPKKKR
2	196	204	ARKRERKRQ
3	198	206	KRERKRQKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44840.1	8e-31	ERF family protein