PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc022455.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 341aa MW: 37951.8 Da PI: 6.2972

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc022455.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	66	6.1e-21	219	275	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK + +s+fpr Ct++ gC++ k+v++ ++d++++eitY g+H+++ Cse_sc022455.1_g030.1 219 GDGYSWRKYGQKGILNSKFPR----CTHKhvlGCNALKQVQQLEDDTNMFEITYIGHHTCT 275 5*****************7....8887778*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MESAQNVTNV SNNATSMVEG QVTNEQPTSN LSTKSKDVKH TSNLATNPNV IKHVATSSCR 60 HAGNESESDV DDVFDEIGSF VASKQSKNDG GWKEIVDDDY DPYDDDEYNA NGLSEEQEAF 120 CDALDIKLRS RNSAKRLQTL LHQKVDDDKL VSVDGLVNEI SESFYHGLLV LTPTSTHLGL 180 ACNQVCHGKP PAPATKERRG CYKRRKTIDS RMEISGTIGD GYSWRKYGQK GILNSKFPRC 240 THKHVLGCNA LKQVQQLEDD TNMFEITYIG HHTCTPPNTS SHHRVVLDSK KFKNNHYSQS 300 NPTSVSTNNQ SDAFLKQEDQ CHNVSLANDA QLTPALVWHE I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	230	KRRKTIDSRMEISGTIGDGYSWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	2e-28	WRKY family protein