PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021985.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 291aa    MW: 32401.1 Da    PI: 6.796
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021985.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-10135183355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                             +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Cse_sc021985.1_g020.1 135 NSHSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 183
                            58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGSSENDDSE MGYQYRGEMS SGSMFNNKSS SGSGNLFGPG WDPLENFGTY PLMNQYQSGE  60
LVPKMMVNPS ASPNSNSNNS SREKRRLNPN MNGDNVSEND EKKLRVDSKG KQVNEGSDRK  120
EDYVHMRAKR GQATNSHSLA ERVRREKISE RMKLLQDLVP GCNKITGKAV MLDEIINYVQ  180
SLQQQVEFLS MKLATVNPEV NIDIDRLVFK DVLHSRGCIS NPAFGFSHTV NPSHSYSHGN  240
LPCVPATTAQ LHAIHPQPVW DNDLHNLLQM GYDVNPGTNS LGPNGREKMD L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-71bHLH family protein