PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc021856.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 386aa MW: 45125.4 Da PI: 8.1711 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 21.1 | 8e-07 | 71 | 92 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ + +Lk+H++ H Cse_sc021856.1_g030.1 71 VCEECGVSFKKPAHLKQHMQGH 92 6******************988 PP | |||||||
2 | zf-C2H2 | 20 | 1.9e-06 | 104 | 128 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp dC+ s++rk++L+rH+ H Cse_sc021856.1_g030.1 104 FTCPvkDCNLSYRRKDHLTRHLIQH 128 89*******************9877 PP | |||||||
3 | zf-C2H2 | 12.6 | 0.0004 | 135 | 158 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 Cp +C+ Fs++ +++rH + H Cse_sc021856.1_g030.1 135 CPikKCTSKFSTQGDMERHVQEiH 158 9999***************99877 PP | |||||||
4 | zf-C2H2 | 19 | 3.9e-06 | 170 | 194 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C Cgk F+ s L++H ++H Cse_sc021856.1_g030.1 170 YVCLepGCGKAFRYASKLQKHENSH 194 899999****************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MEEVKMMEET ITKEKRVPKF RDIRRYACEY CGIVRSKKTL INLHIQSNHQ DEIKEKKDDR 60 EEVENGTKKN VCEECGVSFK KPAHLKQHMQ GHSLEVYFEE MRPFTCPVKD CNLSYRRKDH 120 LTRHLIQHER KPLNCPIKKC TSKFSTQGDM ERHVQEIHDK ADDENDENKY VCLEPGCGKA 180 FRYASKLQKH ENSHVQLETV EAFCGEPGCM KFFTNKQCLM AHLQTCHQYI NCEICGSKQL 240 RKNIKRHLHT HEKGVCTERI RCSFEGCKLT FSNVRNLQSI PDSNLRQHVK AAHLQEKPFV 300 CSFSDCGMRF AYKHVRDNHE KTGLHVYTVG DFVEADTEFH SRPRGGTKRK LPAMIENLLK 360 KRVLPPNGSD CHDADYFSWF SGDEEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-126 | C2H2 family protein |