PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc021757.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 215aa MW: 24235.4 Da PI: 8.503 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 5 | 48 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eEd +l+++v+ G ++W+ I + ++ gR++k+c++rw + Cse_sc021757.1_g020.1 5 SWTPEEDAKLIQLVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 48 7*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 57 | 99 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc021757.1_g020.1 57 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 99 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MVERSWTPEE DAKLIQLVET QGARNWSVIG SSIPGRSGKS CRLRWCNQLS PNVQHRPFTP 60 HEDDVILRAH LIHGNKWSVI SKLLPGRTDN AIKNHWNSTL RRRGLTLTRS SESESTQSDD 120 NEGLKNKRRR CVSVSMSDVS SCDGMTVLTL LPPRDEGEKK KAGGDEVEKE IDDTCLVDVM 180 RKMIAKEVRS YIDELRAKDV LSFGAVLRPV AQQSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 2e-43 | MYB family protein |