PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc021511.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family AP2
Protein Properties Length: 170aa    MW: 19503.4 Da    PI: 9.6896
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc021511.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.11.9e-1258109155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                            s y+GV++++++grW A+I  +        k  +lg+f  +ee a+a++ a  k++g
  Cse_sc021511.1_g010.1  58 SIYRGVTRHHQQGRWQARIGRV-----AghKDLYLGTFAIEEEVAEAYDIATIKFRG 109
                            57****************9885.....235********************9998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MGRIKSCRSI FEEWNQLLYF CFAVANYAQE LQDMKNATKQ EFIASLIRKS SGFSRGASIY  60
RGVTRHHQQG RWQARIGRVA GHKDLYLGTF AIEEEVAEAY DIATIKFRGI NAMTNFEMNR  120
YDVEAISSSS LPVGGSGKPD LVYLKRPLQW LYCRLQVVGK LKELNLQFSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.18e-60AP2 family protein