PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc020529.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 273aa MW: 30412.3 Da PI: 8.3616 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.2 | 1.4e-18 | 129 | 183 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee+F+ ++ ++ +++++LA++l+Lt rqV vWFqNrRa+ k Cse_sc020529.1_g060.1 129 RKKLRLTKPQSALLEEAFKLHNSLNPKQKQDLARELKLTPRQVEVWFQNRRARTK 183 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 120.5 | 8.7e-39 | 129 | 218 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+k q++lLEe F+ ++ L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+dye+Lk+++++l++en+rL+ke +eL+ Cse_sc020529.1_g060.1 129 RKKLRLTKPQSALLEEAFKLHNSLNPKQKQDLARELKLTPRQVEVWFQNRRARTKLKQTEMDYEHLKKCCETLTDENRRLHKELQELK 216 69*************************************************************************************9 PP HD-ZIP_I/II 89 eel 91 +l Cse_sc020529.1_g060.1 217 -TL 218 .55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGFDSICNTG LVLGLSLNSS PPTITSNTMN TDTIPTFEPS LTLGLLGNTN VNKKLVVSGG 60 GDHLGGLYRQ DSTVNSGGGS SFSNMSVKRE REVGSEESER VSNDNNYSRV MSATSVDDNE 120 DDDSYVNGRK KLRLTKPQSA LLEEAFKLHN SLNPKQKQDL ARELKLTPRQ VEVWFQNRRA 180 RTKLKQTEMD YEHLKKCCET LTDENRRLHK ELQELKTLKS SQPLYMQMPA ATLTMCPSCE 240 RIGDTKSSVV ENPFTMAAKP RFFKSFTNPS AAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 178 | 186 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 1e-78 | HD-ZIP family protein |