PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020053.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 303aa    MW: 33514.9 Da    PI: 6.593
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020053.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260140.26.8e-447104198
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv k+l++l++++reda++sl+yeA+ar+rdPvyG+vg+i+ lq++l+
  Cse_sc020053.1_g010.1   7 PCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKILNELSTTQREDAVNSLAYEADARLRDPVYGCVGLISILQHRLK 94 
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallk 98 
                            q++++l+ +k
  Cse_sc020053.1_g010.1  95 QVQSDLHNAK 104
                            *****99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DQPQKFANVH KVFGASNVAK ILNELSTTQR  60
EDAVNSLAYE ADARLRDPVY GCVGLISILQ HRLKQVQSDL HNAKLELAAY IGPSAMLPIL  120
NQGFVPQIAN MPSSSVPVMP YNMQPMLGMM PSQHQAQILE AQQQQQQQQR KQLVAVANAR  180
DQQEMMRNYE QLQQPLQQQH PDELARFSGA FDAAAGSGQV VNGNSFSPVT APAVVMSPSL  240
GLGGSFVNNS MYQIQHQPQQ EQNHHLDIND LQQHQLLLQQ ETQQPLPAQR VASEEERGAA  300
STC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.15e-75LBD family protein