PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc019557.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 269aa    MW: 30114.9 Da    PI: 6.1736
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc019557.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.82.6e-133776243
                           SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
        Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43
                           g+W++eEde l ++++++  + W++I++ ++ gR++k+c sr
  Cse_sc019557.1_g040.1 37 GPWSPEEDEVLENLIEKHDRN-WSLISKSIP-GRSAKSCWSR 76
                           89*****************66.*********.*******776 PP
2Myb_DNA-binding44.82.9e-1477117345
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                            ++T eEde l+++++++G++ W+ I++ ++ gR++k c +rw 
  Cse_sc019557.1_g040.1  77 PFTLEEDEMLKKLIEKHGPN-WSVISKSIP-GRSAKTCELRWE 117
                            89****************77.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MTIDLWSSVI CLVCCTVLAV YGIVIKRQKK DMDQIEGPWS PEEDEVLENL IEKHDRNWSL  60
ISKSIPGRSA KSCWSRPFTL EEDEMLKKLI EKHGPNWSVI SKSIPGRSAK TCELRWETIW  120
HSLQSHEDIE NHWNLTLKRK GSSMTNEDLT ISDHNIFIQP PSVRDINGGQ RNSYIHDLTL  180
RLALGGVSDQ APSIGDMSME TGSQNSIQQG NSSHEVGGMV SGQAPSISDM VRGNMSSGCT  240
HSFSHDKSAP SWNALIKRDS SLMMTESYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.13e-25MYB family protein