PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc018802.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 344aa    MW: 38979.7 Da    PI: 6.5173
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc018802.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.66.7e-20138176138
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 
                            ++D+y+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv
  Cse_sc018802.1_g010.1 138 VKDEYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKV 176
                            58***************************99*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MVAASHALDL NLNLFHITDD DTPVVEVQSS SDNEDDDDDG SFEKEVDDRT AGNLGRISKE  60
NKKLKEMLTI VWDNYNTLQT QVKKIIQDNE VVESSPKKRK FDETVQQSLW NRPNEELPKS  120
GIQRVYVQID PSDKSLIVKD EYQWRKYGQK VTRDNPSPRA YYKCSFAPSC PVKKKVGLLI  180
TLILIGYYLF ERLDLDLIIC MSTRKGKAIK KSLLIKHTML FQVQRSLDDV GIVVVTYEGE  240
HNHRSTKQEA AYALTNEYDI STSEQMFNSP KGRTTLNEVK SKKTEAKKQA EGQTDAQSQS  300
HVQPVGDQSK SHVHSSGEQY ESHVQANTVP SDSQCHNAVQ ANVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-37WRKY family protein