PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc018628.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 325aa MW: 36346.4 Da PI: 4.8959

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc018628.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.4	8e-11	144	189	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +Er+RR+++N f llP++ kK++K+++Le+A+++I +L Cse_sc018628.1_g030.1 144 DHVLAERKRREKLNRHFISMSALLPNL-----KKMDKISVLEEATNHIIEL 189 6889*********************.....9*************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MAMDLSPMWL PQLEMDDGGF MNQCATMSKP YDATDSLSYS SFTAESYTEN GCFIDRCYQN 60 PSRFEEKTEM ILPGYQKASN ICTRTQTPKT QGATISSSNT FTISFGDPKP KDKIIPPFDD 120 SICYEDAGTG KVPTVARTPV QVQDHVLAER KRREKLNRHF ISMSALLPNL KKMDKISVLE 180 EATNHIIELH DRVKKLQGLS VVEQKDAKEY TIALKRSRPS DDDTEDSSYQ GINFEDDSVD 240 VVSKLSAEIE VRMSGGSVLV RIYSQRVPSL LVKMLRKMQE LGLSIISSSS MPVANTTTLI 300 IILAQIEDDF LMTATDLVNN LQLAL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	154	ERKRRE
2	150	155	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22770.1	7e-31	bHLH family protein