PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017817.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 269aa MW: 30819.6 Da PI: 6.99

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017817.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	69.6	4.5e-22	115	174	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 +D+++WrKYGqKe+ +++fpr Y+rC ++ gC++ k+v++ ++ + +++tY g H+++ Cse_sc017817.1_g030.1 115 EDEFAWRKYGQKEILNAKFPRCYFRCRHKseGCKALKQVQQLEDGSEKFHVTYFGYHTCQ 174 8************************9999********99***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MEEISISSPN KKRLIGELIK GRDSTKKLQN LLRQKIDNDG VLANDLVVKI LGSFSNTLST 60 LSSLSPGELS RFSACCNDRG LDHSDESEKK PKDRRGCYKR RKTVDSRIKI VDTIEDEFAW 120 RKYGQKEILN AKFPRCYFRC RHKSEGCKAL KQVQQLEDGS EKFHVTYFGY HTCQNMLKDT 180 QMFSDTGALK FYLNFKDSNI SHSPSSHSTI THLLEQEDDS NAQSDDHHLA TSNDDDKQSI 240 ALWKDIIGDD IFKNGISMDD FKFDENVFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	102	KKPKDRRGCYKRRK
2	99	126	KRRKTVDSRIKIVDTIEDEFAWRKYGQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	1e-33	WRKY family protein