PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017044.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 378aa MW: 41265.4 Da PI: 8.8828

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017044.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	88.7	1.3e-27	70	176	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 ++k+++++++hTkv+gR+RR+ r+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s++ Cse_sc017044.1_g010.1 70 PPKRTSTKDRHTKVDGRGRRIP-------RVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSSMSIP 150 789***************95.......9*************************************9998888888888877777 PP TCP 89 .........................k 89 Cse_sc017044.1_g010.1 151 shlrstyfnpnftiperkkliqtigL 176 66666777777777766554444431 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDSGNDHFLN NHHHHHQRPN FPFQLLEKKD DEATTSSNTT TTATHTSNFS NMQIVQTATT 60 SSGEPSKKQP PKRTSTKDRH TKVDGRGRRI PRVFQLTREL GHKSDGETIE WLLQQAEPSV 120 IAATGTGTIP ANFTSLNISL RSSGSSMSIP SHLRSTYFNP NFTIPERKKL IQTIGLSPSD 180 NNNSSSNHLT FGSGMNLNQL LQAKQEMRET TIDITESDDQ TLARKRRSPG ELDLSSQQHH 240 HQQLGSYLMQ STTGALAASH PSVPANFWMV ANANQHQHQH QHQIMNGDPI WTFPNVNNNA 300 GAVYRGTVSS GLHFMNFPPV AIMPGQQMAS GGYSEGQVNM LGGLNSYRPI FGAGSLESPA 360 SGSHRGGGGG DDSTSHNS

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDSGNDHFLN NHHHHHQRPN FPFQLLEKKD DEATTSSNTT TTATHTSNFS NMQIVQTATT  60
SSGEPSKKQP PKRTSTKDRH TKVDGRGRRI PRVFQLTREL GHKSDGETIE WLLQQAEPSV  120
IAATGTGTIP ANFTSLNISL RSSGSSMSIP SHLRSTYFNP NFTIPERKKL IQTIGLSPSD  180
NNNSSSNHLT FGSGMNLNQL LQAKQEMRET TIDITESDDQ TLARKRRSPG ELDLSSQQHH  240
HQQLGSYLMQ STTGALAASH PSVPANFWMV ANANQHQHQH QHQIMNGDPI WTFPNVNNNA  300
GAVYRGTVSS GLHFMNFPPV AIMPGQQMAS GGYSEGQVNM LGGLNSYRPI FGAGSLESPA  360
SGSHRGGGGG DDSTSHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	3e-48	TCP family protein