PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017022.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 380aa    MW: 40853.8 Da    PI: 10.1785
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017022.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.32.1e-18196229134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            C++C  tkTp+WR+gp g+ktLCnaCG++yr+ +
  Cse_sc017022.1_g050.1 196 CTHCEITKTPQWREGPMGPKTLCNACGVRYRSGR 229
                            *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MNSKDNKGMC ASVENGLYGD VDFELLNFDL PDTLEGDGCI GDWSMNLGPI PADIFAEVPA  60
VSRVGDKIGN GNGNYGGGGG SMDFLSVDVK ESFKSQLKQH PSTFFDERKM CRIPKSFEAP  120
SPDSVLERRI STSTGKTKTI PLGPEITIPV KARTNRSRPS STSNSWSKSL LLVPLEKEKK  180
KRRVVSQLPN NENKKCTHCE ITKTPQWREG PMGPKTLCNA CGVRYRSGRL FPEYRPAASP  240
TFIPSLHSNS HRKVIEMRQK GVGFVKKPTP AITYPAGAGN GVFVKQPAIT TILNSAGAGN  300
GVFVKKPTTT AIPYPAGSVD GVFVKKPRTT AIPYPVGAGD GVFVKKPTTA IPFPAGAGYG  360
VFVNKPMGSI PTLTRLGSDY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179183KKKRR
2179184KKKRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.23e-38GATA family protein