PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016579.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 22838.9 Da PI: 9.626 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.2 | 2.6e-20 | 93 | 143 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ taeeAa a+++a+ +++g Cse_sc016579.1_g010.1 93 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAIAYDRAAYRMRG 143 8********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MQTEFFPTFS RSTSFSTLVP CLSENWGDLP LKVDDSDDMV IYGILRDAVS VGWTPFNFSA 60 KEIKPEPIVK IEPASTTAQL PEVEAPIPVK GKHYRGVRQR PWGKFAAEIR DPAKNGARVW 120 LGTYETAEEA AIAYDRAAYR MRGSKALVNF PHRVGLNEPE PVRVTSKRKS ASPSASLSTS 180 SDTSSAKRRI VKVAEPEVQS RSPKEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 1e-47 | ERF family protein |