PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015869.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 286aa    MW: 32602.5 Da    PI: 9.2465
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015869.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.33.8e-40692123134
                    TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssasec...eaessss 80 
                             kkd hskihT++g+RdRRvRls+e+ ++fF Lqd LGfdk+skt++WL+ ++k  i el++        s s++se+   e ++++s
  Cse_sc015869.1_g030.1  69 SKKDHHSKIHTAQGPRDRRVRLSIEVSRKFFFLQDLLGFDKASKTLDWLFSKSKIPIEELVKEkdqglssSISDQSEVvfpEIVEERS 156
                            69*************************************************************8777664333333335554444444 PP

                    TCP  81 sasnsssg....kaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134
                             ++ ++ +        ++   ++k+ +++ +  +++++sra+arararert+ekm+ k+
  Cse_sc015869.1_g030.1 157 GVQDKRVKmkpgT---KSVeGKRKKITQKYNSGSPMNQSRAEARARARERTKEKMSVKK 212
                            4444444464332...333244444444445689999******************9984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MFSPNHFPHL ISPTHDSPPP NSFLDYEQDD LYSKNPFVSA DGLVNGLGLD QCDEYNHDLG  60
LHIKKKKSSK KDHHSKIHTA QGPRDRRVRL SIEVSRKFFF LQDLLGFDKA SKTLDWLFSK  120
SKIPIEELVK EKDQGLSSSI SDQSEVVFPE IVEERSGVQD KRVKMKPGTK SVEGKRKKIT  180
QKYNSGSPMN QSRAEARARA RERTKEKMSV KKLNGECFSS NLALQSSFWS GIESQRDYCG  240
KMGESTMEQN FSTFYSYEHN LVESNDSRSL FKQVVAHEQQ GDRASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.14e-20TCP family protein