PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014941.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 288aa MW: 31758.5 Da PI: 7.3678

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014941.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00063	198	220	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H Cse_sc014941.1_g030.1 198 HECSICGAEFASGQALGGHMRRH 220 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MQAHHQEDDY TSIMADSRNM IIKGKRTKRP RPSSPLALTM ASTSSTTTSE DGDIENPNNT 60 FFHMPTSSIE FTRILQDNDE EDMANCLILL AQGQYSPTQQ QPSHSEMVVE TDMARTSGFC 120 AYECKTCNRG FSSFQALGGH RASHKKPPKA NLDDKIRPNM VKQDVDAHHS STTLSLTIGS 180 NHLTHSNPSG SVKVAKVHEC SICGAEFASG QALGGHMRRH RSMPLTTTNC GDSSGCQESK 240 KPKTLMSLDL NLPAPIEDDR KESKFFRSND QMIVFSNSSS SSLVHCRF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	32	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	2e-47	C2H2 family protein