PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013780.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 343aa MW: 39038.4 Da PI: 6.5874

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013780.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.6	2.8e-54	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 +ppGfrFhPtdeel+++yL +kv ++++ + ++i evd++kvePw+Lp+++k +ekewyfF+ rdkky+tg r+nrat+sgyWkatgk Cse_sc013780.1_g020.1 17 MPPGFRFHPTDEELITHYLSNKVVDTNFFA-KAIGEVDMNKVEPWELPRMAKMGEKEWYFFCIRDKKYPTGLRTNRATASGYWKATGK 103 79***********************888.88***********988999****************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 dke+++ ++ lvg+kktLvfy grapkgekt+Wv+he+rle Cse_sc013780.1_g020.1 104 DKEIFK-GRVLVGMKKTLVFYMGRAPKGEKTNWVIHEFRLE 143 **.99***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MMEKLTNLGQ DEDQMDMPPG FRFHPTDEEL ITHYLSNKVV DTNFFAKAIG EVDMNKVEPW 60 ELPRMAKMGE KEWYFFCIRD KKYPTGLRTN RATASGYWKA TGKDKEIFKG RVLVGMKKTL 120 VFYMGRAPKG EKTNWVIHEF RLEGKYSLQN LPKSAKEDVF DLDSLCLELQ NEWVISRVFH 180 KNSSGKKVHI SGLLTMDSGG ITTSLPPLTD SAPSFGGRII NSSMPAPCFS NPIENQTTQK 240 NMINNFDNNP IFYHNMMLES QSNPIMHHFS SSSPFMVHDQ SILRDLVGSH THGLKMETEM 300 VTLSPDKNNE ISPNFDKGKI GINDQDAPST FVGPVDFDCL WNY

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MMEKLTNLGQ DEDQMDMPPG FRFHPTDEEL ITHYLSNKVV DTNFFAKAIG EVDMNKVEPW  60
ELPRMAKMGE KEWYFFCIRD KKYPTGLRTN RATASGYWKA TGKDKEIFKG RVLVGMKKTL  120
VFYMGRAPKG EKTNWVIHEF RLEGKYSLQN LPKSAKEDVF DLDSLCLELQ NEWVISRVFH  180
KNSSGKKVHI SGLLTMDSGG ITTSLPPLTD SAPSFGGRII NSSMPAPCFS NPIENQTTQK  240
NMINNFDNNP IFYHNMMLES QSNPIMHHFS SSSPFMVHDQ SILRDLVGSH THGLKMETEM  300
VTLSPDKNNE ISPNFDKGKI GINDQDAPST FVGPVDFDCL WNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-121	NAC family protein