PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013731.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 356aa    MW: 40084.3 Da    PI: 4.968
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013731.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.3e-112853251055
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            r+RR+riN+++ +L++l+P+      +K++ +++Le+Av+Y+k Lq
  Cse_sc013731.1_g010.1 285 RKRRERINERLKTLQTLVPNG-----TKVDISTMLEEAVHYVKFLQ 325
                            9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MFSCDQNSDH FMGHELLSNE YEHGLNPSIL WPSSNESNSS NSSVVDDQIN LAYPSDHDLK  60
SNFHNYFSLE STNSTDSPPY PFHDIFQFSA PSNTLLDNVS NQSNDVCVME GDYANFSLLA  120
EVFSDEAMED MLCLTQDEVV ERGKKENSAG QHVPNIGDVG KETFLKRKYE MLELPYLLKE  180
GNTGRMDKNP KKKSRVSRDN KSTKKSPPKK NQKLITTINR NEDDGGKEND QINSNGRGDV  240
QSSSSCSSED DSNVSQKLQE EANNLSAKTR ASRGAATDPQ SIYARKRRER INERLKTLQT  300
LVPNGTKVDI STMLEEAVHY VKFLQLQIKL LSSDDKWMYA PIAYNGMDMG LYQTIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-51bHLH family protein