PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013340.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 230aa MW: 26670.8 Da PI: 7.9794 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.1e-16 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+++Ed++l d++ +G g+W++I+ + g+ R +k+c++rw +yl Cse_sc013340.1_g050.1 15 RGLWSPDEDKKLRDYIMNHGLGCWSSIPIHAGLQRNGKSCRLRWINYL 62 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r+ +T Ed++++ ++ +lG++ W+ I+++++ gRt++++k+rw++yl Cse_sc013340.1_g050.1 68 RDTFTFHEDDIILTLHGMLGNK-WSQISQHLP-GRTDNEIKNRWHSYL 113 7899******************.*********.************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MRFSPSEKPK LKHKRGLWSP DEDKKLRDYI MNHGLGCWSS IPIHAGLQRN GKSCRLRWIN 60 YLRPGLKRDT FTFHEDDIIL TLHGMLGNKW SQISQHLPGR TDNEIKNRWH SYLKKKVHKQ 120 TDSSLESSEA YGCGKLPKIL FDDWLSHNQF QNFGTSSHSL VSTGACHYDF GSQTTVMNNI 180 QEASSYSFAD SVDHLQLNYV HQHVESNFYD IISDDNTCQN FNNIDVAYYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52260.1 | 2e-55 | MYB family protein |