PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012770.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 705aa MW: 81641.9 Da PI: 7.6187

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012770.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.1	9.5e-21	92	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtklele 84 ++Y+e+A+++GFs+r+++++ + + t+r fvC + g++ ++ +++k +r+r+++r+gC+a ++++k++ +w+vt ++++ Cse_sc012770.1_g010.1 92 EYYSEFARQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKSMNENKPQRNRKSSRCGCQAYMRISKTTelgAPEWRVTGFSNH 179 69***********9998877356667999*************9******************99888889***** PP FAR1 85 HnHela 90 HnHel Cse_sc012770.1_g010.1 180 HNHELL 185 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MFSHLFFRFF DRIRWQTGGA DAETVELLKM MSDDAEHLLS VYDDQSDQRS LSLDETSSTE 60 ESPDETKLSL ESTNDAIPYI GQRFPTHDHA YEYYSEFARQ CGFSIRRHRT EGKDGVGKGL 120 TRRYFVCHRA GNTPVKSMNE NKPQRNRKSS RCGCQAYMRI SKTTELGAPE WRVTGFSNHH 180 NHELLEPNQV RFLPAYRTIS DIDKNRILMF AKTGISVQQM MRLLELEKCL EPGFLPFTEK 240 DVRNLLQSFR KVDLEDESID LLRMCRNIKD KDHNFQFEYK LDINNRLENI AWSYASSVQA 300 YEIFGDAVVF DTTHRLNAFD MPLGIWVGMN NYGMPCFFGC ALLREENLKS YSWALKAFLG 360 FMNGKFPQTI LTDQTSCVRE AIAMEMPASK HAYCIWLIVA KFPSWFNAVL GERYNEWKSE 420 FYRLYNMESI EDFEMGWRDM VNSFGLHTNR HINTLFATRS LWALPYLRSH FFAGMTTTAH 480 SKAINAFIQR FLSAQTRLAH FIEQVAVAVD FKDQAGEQQT MQQNLQNICL KTGAPMESHA 540 ASVLTPFAFS KLQDQLVMAA HYASFQLEDG FLVRHHTKLE GGRKVYWVPR EGIISCSCHH 600 FEFSGILCRH TLRVLSTGNC FQIPERYMPL RWRRINMSAK LLQNNLSDHA ERVQLLQGMV 660 SNLVTESSKS TDRLDIALEH VSVLLSRIRE HPVPSSRYAR NDVFT

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MFSHLFFRFF DRIRWQTGGA DAETVELLKM MSDDAEHLLS VYDDQSDQRS LSLDETSSTE  60
ESPDETKLSL ESTNDAIPYI GQRFPTHDHA YEYYSEFARQ CGFSIRRHRT EGKDGVGKGL  120
TRRYFVCHRA GNTPVKSMNE NKPQRNRKSS RCGCQAYMRI SKTTELGAPE WRVTGFSNHH  180
NHELLEPNQV RFLPAYRTIS DIDKNRILMF AKTGISVQQM MRLLELEKCL EPGFLPFTEK  240
DVRNLLQSFR KVDLEDESID LLRMCRNIKD KDHNFQFEYK LDINNRLENI AWSYASSVQA  300
YEIFGDAVVF DTTHRLNAFD MPLGIWVGMN NYGMPCFFGC ALLREENLKS YSWALKAFLG  360
FMNGKFPQTI LTDQTSCVRE AIAMEMPASK HAYCIWLIVA KFPSWFNAVL GERYNEWKSE  420
FYRLYNMESI EDFEMGWRDM VNSFGLHTNR HINTLFATRS LWALPYLRSH FFAGMTTTAH  480
SKAINAFIQR FLSAQTRLAH FIEQVAVAVD FKDQAGEQQT MQQNLQNICL KTGAPMESHA  540
ASVLTPFAFS KLQDQLVMAA HYASFQLEDG FLVRHHTKLE GGRKVYWVPR EGIISCSCHH  600
FEFSGILCRH TLRVLSTGNC FQIPERYMPL RWRRINMSAK LLQNNLSDHA ERVQLLQGMV  660
SNLVTESSKS TDRLDIALEH VSVLLSRIRE HPVPSSRYAR NDVFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein