PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011557.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 608aa MW: 66403.6 Da PI: 6.7255

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011557.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	1e-32	266	323	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+a+Cpvkkkvers+ +++++ei+Y+g Hnh+k Cse_sc011557.1_g010.1 266 DDGYNWRKYGQKQVKGSEYPRSYYKCTHANCPVKKKVERSH-EGHITEIIYKGAHNHPK 323 8**************************************.*************85 PP
2	WRKY	103.5	1.2e-32	442	500	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+++d k v++tYeg+Hnh+ Cse_sc011557.1_g010.1 442 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHD 500 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MGGFDDHVGV IGDWGAPSPS PRTFFSNMLE EAGSRLETDK PKDDNVNSGF TFPGPDKQFG 60 SENGDQVAKQ GGFGEPKVGS SRSGFAERLA ARTGYSAPRL NTDIVKPSAD LAKDSSYLTI 120 PPGLSPTSFL DSPVFLSNSL AQPSPTTGKF PFAPNANGRS SMMFSDSSDR NKDKLFEDFN 180 NTSSFAFKPV PESAPISNQV NPPFMSWQTE NRFPSQNIQT SQNGTSLHHH AVATEKRTEV 240 NGNVQDHHDE DADQRTSGDN GNNNSDDGYN WRKYGQKQVK GSEYPRSYYK CTHANCPVKK 300 KVERSHEGHI TEIIYKGAHN HPKPPPSRRS GLGSSSDIQG GNEWGHDGNL EVTSSTIVHQ 360 GQNGTQFESS DAVDGSTTFS NDEEEDDRAT HGSVSLGYDG EGDESESKRR KVEAYAAEVS 420 GASRAIREPR VVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS TGCTVRKHVE 480 RASHDLKSVI TTYEGKHNHD VPAARNSSHN NSQAQSIQPS QIQNPMARYE RPHFGQGFGP 540 HGYGYGMNLP GPGLGQMAMA GLGPNQYLGQ GMMMPKGEPK VEPVSDPGLN GSVYHHQMMN 600 RMPLGPHM

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MGGFDDHVGV IGDWGAPSPS PRTFFSNMLE EAGSRLETDK PKDDNVNSGF TFPGPDKQFG  60
SENGDQVAKQ GGFGEPKVGS SRSGFAERLA ARTGYSAPRL NTDIVKPSAD LAKDSSYLTI  120
PPGLSPTSFL DSPVFLSNSL AQPSPTTGKF PFAPNANGRS SMMFSDSSDR NKDKLFEDFN  180
NTSSFAFKPV PESAPISNQV NPPFMSWQTE NRFPSQNIQT SQNGTSLHHH AVATEKRTEV  240
NGNVQDHHDE DADQRTSGDN GNNNSDDGYN WRKYGQKQVK GSEYPRSYYK CTHANCPVKK  300
KVERSHEGHI TEIIYKGAHN HPKPPPSRRS GLGSSSDIQG GNEWGHDGNL EVTSSTIVHQ  360
GQNGTQFESS DAVDGSTTFS NDEEEDDRAT HGSVSLGYDG EGDESESKRR KVEAYAAEVS  420
GASRAIREPR VVVQTTSEVD ILDDGYRWRK YGQKVVKGNP NPRSYYKCTS TGCTVRKHVE  480
RASHDLKSVI TTYEGKHNHD VPAARNSSHN NSQAQSIQPS QIQNPMARYE RPHFGQGFGP  540
HGYGYGMNLP GPGLGQMAMA GLGPNQYLGQ GMMMPKGEPK VEPVSDPGLN GSVYHHQMMN  600
RMPLGPHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-147	WRKY family protein