PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011381.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 660aa MW: 73869 Da PI: 6.4083

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011381.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.5	2e-31	312	369	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C++kkk+e++ d++++ei+Y+g+Hnh+k Cse_sc011381.1_g010.1 312 EDGYNWRKYGQKQVKGSENPRSYYKCTYPNCSMKKKLETNI-DGQITEIVYKGNHNHPK 369 7**************************************.*************85 PP
2	WRKY	104.4	6.1e-33	491	549	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts gC+v+k+ver+++d + v++tYeg+Hnh+ Cse_sc011381.1_g010.1 491 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCSVRKHVERASQDMRSVITTYEGKHNHD 549 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MNPQDPRFNL ILGMSQNANS SSSSTPTPPS SGHSITSQNP QFPPFSNQYS TQEAIQDYCR 60 VPTSTEPVEQ GLRTYASLEN TDHGCRVNSI QEFGEVVREE MRRKREVAES MYEITKEIKG 120 CDDYEVGGDD VSRHEHNWNV RRGRGDQAPA ATGLAARISG VPKFKSLPPP SLPISPPAVS 180 PSSYFAIPAG LSPAELLDSP VLLNSSNILP SPTTGSFPFQ AFNWKNFGGN VKNQEEGVKK 240 EEKSFSDFSF QPQLNYSDEQ QIWNNQKFRD QEQKPFAQSE LTMVQTDSNS QTQSFQSSYA 300 TNTNQTTNKK SEDGYNWRKY GQKQVKGSEN PRSYYKCTYP NCSMKKKLET NIDGQITEIV 360 YKGNHNHPKP QSTRRSSSST SSLGSNNLQM SSQILSNHEV HDYPEQSYGS QGSGPFNSVA 420 TPENSSISVG DDEFDRSRSR SGGDDLDADE DEPQTKRWRA SENEGISMIG GTRTVREPRV 480 VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSL GCSVRKHVER ASQDMRSVIT 540 TYEGKHNHDV PMARGSGHRL ATATAGNNVP TMAIKPMAIS HYQANNSMVD PIRGSRFAPS 600 SDNQSPFTLE MLQSPGSFKF SRFENALKSN YIDQQHDSER EFSETKEEPR DDMFLESLLF

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MNPQDPRFNL ILGMSQNANS SSSSTPTPPS SGHSITSQNP QFPPFSNQYS TQEAIQDYCR  60
VPTSTEPVEQ GLRTYASLEN TDHGCRVNSI QEFGEVVREE MRRKREVAES MYEITKEIKG  120
CDDYEVGGDD VSRHEHNWNV RRGRGDQAPA ATGLAARISG VPKFKSLPPP SLPISPPAVS  180
PSSYFAIPAG LSPAELLDSP VLLNSSNILP SPTTGSFPFQ AFNWKNFGGN VKNQEEGVKK  240
EEKSFSDFSF QPQLNYSDEQ QIWNNQKFRD QEQKPFAQSE LTMVQTDSNS QTQSFQSSYA  300
TNTNQTTNKK SEDGYNWRKY GQKQVKGSEN PRSYYKCTYP NCSMKKKLET NIDGQITEIV  360
YKGNHNHPKP QSTRRSSSST SSLGSNNLQM SSQILSNHEV HDYPEQSYGS QGSGPFNSVA  420
TPENSSISVG DDEFDRSRSR SGGDDLDADE DEPQTKRWRA SENEGISMIG GTRTVREPRV  480
VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSL GCSVRKHVER ASQDMRSVIT  540
TYEGKHNHDV PMARGSGHRL ATATAGNNVP TMAIKPMAIS HYQANNSMVD PIRGSRFAPS  600
SDNQSPFTLE MLQSPGSFKF SRFENALKSN YIDQQHDSER EFSETKEEPR DDMFLESLLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein