PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc011119.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 174aa MW: 19783.5 Da PI: 9.8073 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.4 | 1.1e-15 | 40 | 82 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed+ +++a+ +G++ W+ I++ ++ gRt++ +k++w++ Cse_sc011119.1_g030.1 40 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 82 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
VQTVKAECQY CTNRRRRQAD TVSGNKRCKE LLSPNVQHRP FTPHEDDVIL RAHLIHGNKW 60 SVISKLLPGR TDNAIKNHWN STLRRRGLTL TRSSESESTH SYDGMMLLTR LPPGDGDKRK 120 GGDEVEKEIE DTCLVDVMKK MIAKEVRSYI DELRAKDGLS FGAVLRSVVN RVSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 9e-19 | MYB family protein |